species:   Drmel
pid:       MI0028924
parent:    dme-mir-9375
paralog:   
locus:     NT_033777.3:6451551-6451609
matures:   ['CCGAGUAUAUGGAAUUUCUGUU', 'CCGAAACUCGAUAUAAUUCAGA']
srr:       SRR11906542
genome:    /Users/jax/+Genomes/Animal_genomes/Drmel.GCF_000001215.4_Release_6_plus_ISO1_MT_genomic.fa
alignment: /media/data/njohnson/+SeqLibraries/FunHP_libraries/Drmel.SRR11906542.cram
call:      samtools view /media/data/njohnson/+SeqLibraries/FunHP_libraries/Drmel.SRR11906542.cram NT_033777.3:6451551-6451609

0 out of bounds
3 alignments
3 proper strand
3 stranded perfect matches

**********************            ************************ 
CCGAGUAUAUGGAAUUUCUGUUUUGCCUAGUAUGAACCGAAACUCGAUAUAAUUCAGAA
..((((((((.((.((((.(((((((...))).)))).)))).)).)))).))))....
CCGAGUAUAUGGAAUUUCUGUU------------------------------------- l=22 a=0 c
------------------------------------CCGAAACUCGAUAUAAUUCAGA- l=22 a=1 c*
------------------------------------CCGAAACUCGAUAUAAUUCAGA- l=22 a=1 ma
-CGAGUAUAUGGAAUUUCUGUU------------------------------------- l=21 a=0 ma*

------------------------------------CCGAAACUCGAUAUAAUUCAG-- l=21 a=1 
------------------------------------CCGAAACUCGAUAUAAUUCAGA- l=22 a=1 (c*,ma)
---------------------UUUGCCUAGUAUGAACCGA------------------- l=19 a=1 

mb-01011
ax-1011011
ku-01
ss-100111101110
fn-011
